Live
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R Weekly 2020-40 learnr tutorials, visual markdown editing, stat_layers
Release Date: 2020-10-05
This week’s release was curated by Jonathan Carroll, with help from the RWeekly team members and contributors.
Highlights
Insights
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sparklyr 1.4: Weighted Sampling, Tidyr Verbs, Robust Scaler, RAPIDS, and more
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Rectifying Hand-Drawn Marks on Maps With the mapscanner Package
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Running an R Script on a Schedule: Docker Containers on gitlab
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A map of commuter patterns in the U.S. northeast using Flowmap.blue.
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“package ‘foo’ is not available” - What to do when R tells you it can’t install a package
Teaching (with) R
Resources
New Packages
CRAN
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{usemodels} 0.0.1: Boilerplate Code for ‘Tidymodels’ Analyses
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{mapchina} 0.1.0: Geospatial shapefile (vector data) of China administrative divisions to the county/district-level
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{pkgKitten} 0.2.0: Now with tinytest and new docs
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{tsibbletalk} 0.1.0: Interactive Graphics for Tsibble Objects
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{epitweetr} 0.1.20: Early Detection of Public Health Threats from Twitter Data
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{sccore} 0.1.0: Core Utilities for Single-Cell RNA-Seq
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{robservable} 0.2.0: Import an Observable Notebook as HTML Widget
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{rintimg} 0.1.0: View Images on Full Screen in ‘RMarkdown’ Documents and ‘shiny’ Applications
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{prettifyAddins} 0.1.0: ‘RStudio’ Addins to Prettify ‘HTML’, ‘CSS’, ‘JavaScript’, and More
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{covid19br} 0.1.0: Brazilian COVID-19 Pandemic Data
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{wordpressr} 0.1.1: An API Wrapper for WordPress Site APIs
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{triangulr} 1.0.0: High-Performance Triangular Distribution Functions
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{medrxivr} 0.0.3: Access and Search MedRxiv and BioRxiv Preprint Data
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{htmldf} 0.1.0: Simple Scraping and Tidy Webpage Summaries
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{rle} 0.9.2: Common Functions for Run-Length Encoded Vectors
GitHub or Bitbucket
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{creature} 0.1.0: Interactive Animations in Rmd Documents and Shiny Apps
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{rsthemes} 0.1.0: 🔮 Full Themes for RStudio v1.2+
Updated Packages
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{meta} 4.15-0: General Package for Meta-Analysis
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{h2o} 3.30.1.3: R Interface for the ‘H2O’ Scalable Machine Learning Platform
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{pinp} 0.0.10: More Tweaks
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{covid19.analytics} 2.0: Load and Analyze Live Data from the CoViD-19 Pandemic
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{Deriv} 4.0.1: Symbolic Differentiation
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{keyToEnglish} 0.2.0: Convert Data to Memorable Phrases
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{ggvis} 0.4.6: Interactive Grammar of Graphics
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{broom} 0.7.1: Convert Statistical Objects into Tidy Tibbles
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{otpr} 0.4.2: An R Wrapper for the ‘OpenTripPlanner’ REST API
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{JuliaConnectoR} 0.6.2: A Functionally Oriented Interface for Integrating ‘Julia’ with R
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{openair} 2.7-6: Tools for the Analysis of Air Pollution Data
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{cpp11} 0.2.2: A C++11 Interface for R’s C Interface
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{nptest} 1.0-2: Nonparametric Bootstrap and Permutation Tests
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{webmockr} 0.7.0: Stubbing and Setting Expectations on ‘HTTP’ Requests
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{vroom} 1.3.2: Read and Write Rectangular Text Data Quickly
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{rmarkdown} 2.4: Dynamic Documents for R
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{minidown} 0.0.2: Create Simple Yet Powerful HTML Documents with Light Weight CSS Frameworks
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{RSQLite} 2.2.1: ‘SQLite’ Interface for R
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{duckdb} 0.2.1-2: DBI Package for the DuckDB Database Management System
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{tidytable} 0.5.6: Tidy Interface to ‘data.table’
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{gtsummary} 1.3.5: Presentation-Ready Data Summary and Analytic Result Tables
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{systemfonts} 0.3.2: System Native Font Finding
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{gtfsrouter} 0.0.4: Routing with GTFS (General Transit Feed Specification) Data
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{readxlsb} 0.1.4: Read ‘Excel’ Binary (.xlsb) Workbooks
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{xfun} 0.18: Miscellaneous Functions by ‘Yihui Xie’
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{modelsummary} 0.6.2: Summary Tables and Plots for Statistical Models and Data: Beautiful, Customizable, and Publication-Ready
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{polished} 0.2.0: Authentication and Administration for ‘shiny’ Apps
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{feedeR} 0.0.10: Read RSS, Atom and RDF Feeds
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{av} 0.5.1: Working with Audio and Video in R
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{torch} 0.1.0: Tensors and Neural Networks with ‘GPU’ Acceleration
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{tidycensus} 0.10.2: Load US Census Boundary and Attribute Data as ‘tidyverse’ and ‘sf’-Ready Data Frames
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{modeltime} 0.2.0: The Tidymodels Extension for Time Series Modeling
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{RPostgres} 1.2.1: ‘Rcpp’ Interface to ‘PostgreSQL’
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{fakemake} 1.8.0: Mock the Unix Make Utility
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{packager} 1.5.0: Create, Build and Maintain Packages
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{survival} 3.2-7: Survival Analysis
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{quantreg} 5.73: Quantile Regression
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{bomrang} 0.7.1: Australian Government Bureau of Meteorology (‘BOM’) Data Client
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{shinybusy} 0.2.2: Busy Indicator for ‘Shiny’ Applications
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{esquisse} 0.3.1: Explore and Visualize Your Data Interactively
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{pkgKitten} 0.2.0: Create Simple Packages Which Do not Upset R Package Checks
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{Seurat} 3.2.2: Tools for Single Cell Genomics
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{cyclestreets} 0.3.0: Cycle Routing and Data for Cycling Advocacy
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{matrixStats} 0.57.0: Functions that Apply to Rows and Columns of Matrices (and to Vectors)
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{jrc} 0.4.0: Exchange Commands Between R and ‘JavaScript’
Videos and Podcasts
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Rapid Analysis and Presentation of Quality Improvement Data with R
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Step by Step Guide to Deploy R Shiny App for Free on Shinyapps.io
R Internationally
Tutorials
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Road Routing in R Comparing three popular routing APIs & their respective R packages: {osrm}, {mapboxapi} and {hereR}.
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How to Generate a Sequence of Numbers in R with :, seq() and rep()
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R Package Integration with Modern Reusable C++ Code Using Rcpp - Part 6
R Project Updates
Updates from R Core:
Upcoming Events in 3 Months
Events in 3 Months:
Call for Participation
Quotes of the Week
My new favorite teaching tool in R is the fabricerin package. Thank you @moh_fodil. pic.twitter.com/gRl0VX4kQZ
— Mine Dogucu (@MineDogucu) October 2, 2020
Do you have a list of author names and need their ORCiDs? New function in scienceverse (check alt text for the code).https://t.co/bUZZdlVpWR pic.twitter.com/sKzgBDugcj
— Lisa DeBruine 🏳️🌈 (@LisaDeBruine) September 30, 2020
Multiple source columns - work on #rstats scripts side-by-side!
— Tom Mock (@thomas_mock) September 30, 2020
(Note you can set as many columns as you like!) pic.twitter.com/w8KPaCHIN3